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Bovine Metabolome Database

Showing metabocard for Pentacarboxyl porphyrinogen III (BMDB01957)

Legend: metabolite field enzyme field

Version 1.0
Creation Date 2006-05-22 15:17:29
Update Date 2009-05-05 20:58:59
Accession Number BMDB01957
Common Name Pentacarboxyl porphyrinogen III
Description Substrate for erythrocyte uroporphyrinogen decarboxylase in patients with porphyria cutanea tarda (PubNed ID 1610684 )
  1. Pentacarboxylporphyrinogen III
  2. Pentacarboxyporphyrinogen III
Chemical IUPAC Name Not Available
Chemical Formula C37H40N4O10
Chemical Structure Structure
Chemical Taxonomy
  • Organic
Super Class
  • Heterocyclic molecules
  • Porphyrins
Sub Class
  • Miscellaneous porphyrins
  • Mammalian_Metabolite
  • imine; enamine; carboxylic acid; alkene; aromatic compound; heterocyclic compound
  • Endogenous
Average Molecular Weight 700.734
Monoisotopic Molecular Weight 700.274414
Isomeric SMILES CC1=C(CCC(O)=O)C2=NC1CC1=C(C)C(CCC(O)=O)=C(N1)/C=C1N=C(C=C3NC(=C2)/C(CCC(O)=O)=C3CC(O)=O)C(CCC(O)=O)=C1C
Canonical SMILES CC1=C(CCC(O)=O)C2=NC1CC1=C(C)C(CCC(O)=O)=C(N1)C=C1N=C(C=C3NC(=C2)C(CCC(O)=O)=C3CC(O)=O)C(CCC(O)=O)=C1C
KEGG Compound ID Not Available
BioCyc ID Not Available
BiGG ID Not Available
Wikipedia Link Not Available
METLIN ID 6401 Link Image
PubChem Compound Not Available
PubChem Substance Not Available
ChEBI ID Not Available
CAS Registry Number Not Available
InChI Identifier InChI=1/C37H40N4O10/c1-17-20(4-8-33(42)43)28-14-27-19(3)22(6-10-35(46)47)30(40-27)16-32-24(12-37(50)51)23(7-11-36(48)49)31(41-32)15-29-21(5-9-34(44)45)18(2)26(39-29)13-25(17)38-28/h14-16,26,38,41H,4-13H2,1-3H3,(H,42,43)(H,44,45)(H,46,47)(H,48,49)(H,50,51)/b27-14-,31-15-,32-16-
Synthesis Reference Not Available
Melting Point (Experimental) Not Available
Experimental Water Solubility Not Available Source: PhysProp
Predicted Water Solubility 0.0337 mg/mL [Predicted by ALOGPS] Calculated using ALOGPS
Physiological Charge -5
State Solid
Experimental LogP/Hydrophobicity Not Available Source: PhysProp
Predicted LogP/Hydrophobicity 1.66 [Predicted by ALOGPS] Calculated using ALOGPS
Material Safety Data Sheet (MSDS) Not Available
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SDF File Show
PDB File Show
2D Structure
3D Structure
Experimental PDB ID Not Available
Experimental 1H NMR Spectrum Not Available
Experimental 13C NMR Spectrum Not Available
Experimental 13C HSQC Spectrum Not Available
Predicted 1H NMR Spectrum Show Image
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Predicted 13C NMR Spectrum Show Image
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Mass Spectrum Not Available
Simplified TOCSY Spectrum Not Available
BMRB Spectrum Not Available
Cellular Location Not Available
Biofluid Location Not Available
Tissue Location Not Available
Concentrations (Normal) Not Available
Concentrations (Abnormal) Not Available
Pathway Names Not Available
HMDB Pathways Not Available
KEGG Pathways Not Available
SimCell Pathways Not Available
General References Not Available